{"servers":[{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.1.0","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.0","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.0","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-06-15T19:24:12.967031Z","publishedAt":"2026-06-15T19:24:12.967031Z","updatedAt":"2026-06-15T19:24:12.967031Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.1.1","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.1","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.1","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-06-18T12:30:55.432685Z","publishedAt":"2026-06-18T12:30:55.432685Z","updatedAt":"2026-06-18T12:30:55.432685Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.1.2","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.2","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.2","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-06-18T13:39:23.019081Z","publishedAt":"2026-06-18T13:39:23.019081Z","updatedAt":"2026-06-18T13:39:23.019081Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & function across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.1.3","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.3","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.3","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-06-20T19:01:46.992082Z","publishedAt":"2026-06-20T19:01:46.992082Z","updatedAt":"2026-06-20T19:01:46.992082Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.1.4","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.4","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.1.4","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-06-23T23:06:35.531772Z","publishedAt":"2026-06-23T23:06:35.531772Z","updatedAt":"2026-06-23T23:06:35.531772Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.2.0","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.2.0","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.2.0","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T09:32:44.757122Z","publishedAt":"2026-07-03T09:32:44.757122Z","updatedAt":"2026-07-03T09:32:44.757122Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.2.1","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.2.1","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.2.1","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T10:30:26.906481Z","publishedAt":"2026-07-03T10:30:26.906481Z","updatedAt":"2026-07-03T10:30:26.906481Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.3.0","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.0","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.0","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T12:03:58.120356Z","publishedAt":"2026-07-03T12:03:58.120356Z","updatedAt":"2026-07-03T12:03:58.120356Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.3.1","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.1","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.1","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T13:51:05.735328Z","publishedAt":"2026-07-03T13:51:05.735328Z","updatedAt":"2026-07-03T13:51:05.735328Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.3.2","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.2","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.2","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T14:32:33.098765Z","publishedAt":"2026-07-03T14:32:33.098765Z","updatedAt":"2026-07-03T14:32:33.098765Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.3.3","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.3","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.3.3","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T15:26:00.624899Z","publishedAt":"2026-07-03T15:26:00.624899Z","updatedAt":"2026-07-03T15:26:00.624899Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.4.0","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.0","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.0","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-07-03T15:59:39.770717Z","publishedAt":"2026-07-03T15:59:39.770717Z","updatedAt":"2026-07-03T15:59:39.770717Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.4.1","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.1","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.1","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-08-17T00:41:57.207518Z","publishedAt":"2026-08-17T00:41:57.207518Z","updatedAt":"2026-08-17T00:41:57.207518Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.4.2","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.2","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.4.2","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-08-17T01:21:57.277428Z","publishedAt":"2026-08-17T01:21:57.277428Z","updatedAt":"2026-08-17T01:21:57.277428Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.5.0","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.5.0","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.5.0","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-08-17T02:08:53.175943Z","publishedAt":"2026-08-17T02:08:53.175943Z","updatedAt":"2026-08-17T02:08:53.175943Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"Federated protein structure & annotation across experimental (PDB) and predicted (AlphaFold) models.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"0.5.1","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.5.1","runtimeHint":"node","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"@cyanheads/protein-mcp-server","version":"0.5.1","runtimeHint":"node","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}],"remotes":[{"type":"streamable-http","url":"https://protein.caseyjhand.com/mcp"}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2026-08-17T02:23:43.255168Z","publishedAt":"2026-08-17T02:23:43.255168Z","updatedAt":"2026-08-17T02:23:43.255168Z","isLatest":false}}},{"server":{"$schema":"https://static.modelcontextprotocol.io/schemas/2025-09-29/server.schema.json","name":"io.github.cyanheads/protein-mcp-server","description":"MCP Server for 3D protein structural data retrieval & analysis from RCSB PDB, PDBe, and UniProt.","repository":{"url":"https://github.com/cyanheads/protein-mcp-server","source":"github"},"version":"1.0.3","packages":[{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"protein-mcp-server","version":"1.0.3","runtimeHint":"bun","transport":{"type":"stdio"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:stdio","type":"positional"}],"environmentVariables":[{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]},{"registryType":"npm","registryBaseUrl":"https://registry.npmjs.org","identifier":"protein-mcp-server","version":"1.0.3","runtimeHint":"bun","transport":{"type":"streamable-http","url":"http://localhost:3010/mcp"},"packageArguments":[{"value":"run","type":"positional"},{"value":"start:http","type":"positional"}],"environmentVariables":[{"description":"The hostname for the HTTP server.","format":"string","default":"127.0.0.1","name":"MCP_HTTP_HOST"},{"description":"The port to run the HTTP server on.","format":"string","default":"3010","name":"MCP_HTTP_PORT"},{"description":"The endpoint path for the MCP server.","format":"string","default":"/mcp","name":"MCP_HTTP_ENDPOINT_PATH"},{"description":"Authentication mode to use: 'none', 'jwt', or 'oauth'.","format":"string","default":"none","name":"MCP_AUTH_MODE"},{"description":"Sets the minimum log level for output (e.g., 'debug', 'info', 'warn').","format":"string","default":"info","name":"MCP_LOG_LEVEL"}]}]},"_meta":{"io.modelcontextprotocol.registry/official":{"status":"active","statusChangedAt":"2025-10-02T22:53:52.408607Z","publishedAt":"2025-10-02T22:53:52.408607Z","updatedAt":"2025-10-02T22:53:52.408607Z","isLatest":true}}}],"metadata":{"count":17}}
